Package ‘ qtl ’ March 5 , 2015
نویسندگان
چکیده
A starting point . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 6 add.cim.covar . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 10 add.threshold . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 11 addcovarint . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 12 addint . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 14 addloctocross . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 16 addmarker . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 17 addpair . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 18 addqtl . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 20 addtoqtl . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 22 allchrsplits . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 24 argmax.geno . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 25 arithscan . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 26 arithscanperm . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 27 badorder . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 28 bayesint . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 29
منابع مشابه
Package ‘ qtl ’ March 21 , 2011
March 21, 2011 Version 1.21-2 Date 18 Mar 2011 Title Tools for analyzing QTL experiments Author Karl W Broman and Hao Wu, with ideas from Gary Churchill and Saunak Sen and contributions from Danny Arends, Ritsert Jansen, Pjotr Prins, and Brian Yandell Maintainer Karl W Broman Description Analysis of experimental crosses to identify genes (ca...
متن کاملR/qtlcharts: Interactive Graphics for Quantitative Trait Locus Mapping
Every data visualization can be improved with some level of interactivity. Interactive graphics hold particular promise for the exploration of high-dimensional data. R/qtlcharts is an R package to create interactive graphics for experiments to map quantitative trait loci (QTL) (genetic loci that influence quantitative traits). R/qtlcharts serves as a companion to the R/qtl package, providing in...
متن کاملvqtl: An R package for Mean-Variance QTL Mapping
Most existing methods for QTL mapping in experimental crosses assume that the residual variance is constant across all individuals. But common situations violate this assumption. For many phenotypes, one sex is more variable than the other, some experimenters make more precise measurements than others, and specific genetic factors influence environmental sensitivity. In these cases, mean-varian...
متن کاملPackage 'damocles' Title Dynamic Assembly Model of Colonization, Local Extinction and Speciation
March 5, 2015 Type Package Title Dynamic Assembly Model of Colonization, Local Extinction and Speciation Version 1.1 Date 2015-03-05 Depends R (>= 3.0), geiger, caper, ape, deSolve, matrixStats Imports expm, picante Author Rampal S. Etienne & Alex L. Pigot Maintainer Rampal S. Etienne License GPL-2 Description Simulates and computes (maximum) likelihood of a dynamical model...
متن کاملPackage ‘ qtl ’ December 3 , 2015
A starting point . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 6 add.cim.covar . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 10 add.threshold . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 11 addcovarint . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 12 addint . ...
متن کامل